I've only just started using OmegaT so I may be missing something obvious here, but when I add a DOCX file to the project, translate it, and then create a translated version, the footnotes are always missing.
All the other formatting is fine as far as I can see, it's just the footnotes are lost.
Is there something I'm not doing here or a setting I've missed?
Works for me - I'd second the suggestion to check you have all your tags preserved. If you lose the reference to the footnote, I believe the footnote itself will not be visible.