I have been using S-Tagger for FrameMaker files for some 8-9 years and I never heard of that possibility of not translating the index entries.
Can you tell us what the format of the S-Tagger translatable files is? Are they TTX files or RTF files? If you convert FrameMaker files to RTF files, at least you have the possibility of making the index entries External, so that they are not included in the analysis. You can do that with Word's Find/Replace function. Just let us know what kind of translatable files you have.
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