pipeline
Polish translation: strumień przetwarzania danych
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| 16:25 Aug 24, 2017 |
| English to Polish translations [PRO] Medical - Medical (general) / genetyka | |||||||
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|  Selected response from: Frank Szmulowicz, Ph. D. United States Local time: 02:51 | ||||||
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| 2 +1 | strumień przetwarzania danych |
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| bioinformatics pipeline |
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| Discussion entries: 2 | |
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Answers
4 hrs confidence: 
peer agreement (net): +1
peer agreement (net): +1strumień przetwarzania danych Explanation: https://www.google.com/url?sa=t&source=web&rct=j&url=http://... -------------------------------------------------- Note added at 4 hrs (2017-08-24 20:54:44 GMT) -------------------------------------------------- Miary uzupełnione są odpowiednimi funkcjami dokonującymi różnych rodzajów normalizacji statystycznej profilu pokrycia – i tworzą strumień przetwarzania danych (ang. pipeline). |
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Notes to answerer
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Reference comments
4 hrs |
| Reference: bioinformatics pipeline Reference information: First, pipeline is not a bioinformatics term its actually a computer science term. It involves the chaining of processes/threads/functions etc. and the example John shows is an example of process threading. Commonly in bioinformatics we use Python (or another scripting language including UNIX shell) to create a pipeline in order to execute, then transform, then execute another program and so on. This chaining of programs allows a bioinformatician to start with one data type, say a FASTQ file obtained from next generation sequencing data (NGS) and end up with variant calling data. To do this a number of programs which analyze and translate the data must be executed. If you’d like an example of a pipeline I’d recommending looking at GATK for a graphical representation of performing variant calling (SNPs & INDELs) take a look at -------------------------------------------------- Note added at 4 hrs (2017-08-24 20:40:20 GMT) -------------------------------------------------- https://www.quora.com/What-are-pipelines-in-Bioinformatics |
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